Molecular Phylogenetics of the Clingfishes (Teleostei: Gobiesocidae)—Implications for Classification
Gobiesocidae are a moderate-sized family (currently 182 species, 51 genera) of predominantly coastal marine fishes, commonly referred to as clingfishes. Depending on the classification adopted, the species and genera of clingfishes are organized either across ten subfamilies, based on a classification scheme introduced in the 1950s (“traditional” classification, comprising Aspasminae, Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Gobiesocinae, Haplocylicinae, Lepadogastrinae, Protogobiesocinae, and Trachelochisminae), or just two subfamilies, in a classification scheme adopted only recently (“reduced” classification, comprising Cheilobranchinae and Gobiesocinae). We investigated the phylogenetic relationships among members of the family Gobiesocidae using both mitochondrial and nuclear DNA sequence data to assess whether the alternative classification schemes (traditional and reduced) are compatible with inferred evolutionary relationships. Phylogenetic hypotheses are derived from maximum-likelihood and Bayesian analyses of a seven-gene concatenated dataset (2 mitochondrial and 5 nuclear markers; 4,857 bp) compiled from individuals representing 82 (of 182) species, 42 (of 51) genera, and 10 (of 10) subfamilies of the Gobiesocidae. Although our investigation provides strong support for the monophyly of the Gobiesocidae, multiple subfamilies of the traditional classification (Aspasminae, Diademichthyinae, Diplocrepinae, Gobiesocinae, and Trachelochisminae), one subfamily of the reduced classification (Gobiesocinae), and multiple genera (Aspasmichthys, Cochleoceps, Lepadogaster, and Lepadichthys) are resolved as non-monophyletic groups. Based on our results and the results of previous studies, we recommend a systematic reassignment of genera between subfamilies, of which we recognize nine: Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Haplocylicinae, Gobiesocinae, Lepadogastrinae, Protogobiesocinae, and Trachelochisminae. Membership of the Lepadogastrinae is unchanged from previous usage; the Cheilobranchinae are expanded to contain additional genera from southern Australia, including those placed previously in the Aspasminae (Nettorhamphos and Posidonichthys) and the Diplocrepinae (Barryichthys, Cochleoceps, and Parvicrepis); the Aspasminae are placed in the synonymy of the Diademichthyinae and all genera placed in the former (excluding Modicus and Posidonichthys) are transferred to the latter; the Diplocrepinae are restricted to Diplocrepis; Eckloniaichthys scylliorhiniceps is transferred from the Gobiesocinae to the Chorisochisminae; Gobiesocinae are restricted to the New World members of this group (Acyrtops, Acyrtus, Arcos, Derilissus, Gobiesox, Rimicola, Sicyases, and Tomicodon); the Haplocylicinae are expanded to include additional genera from New Zealand (Gastrocyathus, Gastrocymba, and Gastroscyphus); the Protogobiesocinae are expanded to accommodate three genera of deep water taxa (Gymnoscyphus, Kopua, and Protogobiesox); and the Trachelochisminae are restricted to Dellichthys and Trachelochismus. Four genera (Aspasmogaster, Conidens, Creocele, and Modicus) of uncertain placement are not assigned to any subfamily herein and are considered incertae sedis within the Gobiesocidae.

Representatives of the Gobiesocidae. (A) Trachelochismus pinnulatus, Trachelochisminae (photograph by P. Caiger); (B) Dellichthys morelandi, Trachelochisminae (P. Caiger); (C) Kopua minima, Trachelochisminae (K. Fujiwara); (D) Haplocylix littoreus, Haplocylicinae (K. Conway); (E) Lepadogaster candolii, Lepadogastrinae (M. Wagner); (F) Gouania willdenowi, Lepadogastrinae (S. Iglésias); (G) Chorisochismus dentex, Chorisochisminae (M. Nieuwoudt); (H) Diplocrepis puniceus, Diplocrepinae (D. Hoffmann); (I) Gastrocyathus gracilis, Diplocrepinae (K. Conway); (J) Gobiesox cephalus, Gobiesocinae (K. Conway); (K) Eckloniaichthys scylliorhiniceps, Gobiesocinae (G. Zsilavecz); (L) Aspasma ubauo, Aspasminae (S. Yamamoto); (M) Discotrema crinophilum, Diademichthyinae (M. Erdmann); (N) Diademichthys lineatus, Diademichthyinae (M. Erdmann); (O) Alabes parvula, Cheilobranchinae (B. Hutchins).

Previously published hypotheses of gobiesocid relationships. (A) Dendrogram of subfamilial relationships provided by Briggs (1955: 144, dendrogram 1). (B) Relationships as depicted in dendograms 2–5 from Briggs (1955: 146, 148) representing relationships within subfamilies Trachelochisminae, Lepadogastrinae, Gobiesocinae, and Diplocrepinae. (C) Topology of lepadogastrine clingfishes derived from Bayesian analysis of mitochondrial genes (12S and 16S) by Almada et al. (2008: fig. 1). (D) Topology derived from maximum-likelihood analysis of six-gene concatenated dataset by Fricke et al. (2017: fig. 1). (E) Topology derived from Bayesian analysis of six-gene concatenated dataset by Conway et al. (2017a: fig. 1). Original branch support values associated with topologies in C–E omitted. Subfamily membership indicated by colored boxes (explained in key).

Maximum-likelihood phylogram obtained from RAxML analysis of the concatenated seven-gene dataset. Branches marked with an asterisk (*) have been shortened to facilitate viewing (see inset topology for original branch lengths). Numbers above branches represent bootstrap (BS) support values. Red branches are those downstream of nodes with BS values ≤75%. Letters (A–J) in gray circles are clades discussed in text. Rows of colored boxes to right side of image represent subfamily designations (see corresponding key) within the following three classification schemes: (1) “traditional” classification with ten subfamilies; (2) alternative “reduced” classification with two subfamilies; and (3) revised classification with ten subfamilies. See Data Accessibility for tree file.

Topology resulting from Bayesian analysis of the concatenated seven-gene dataset. Branches marked with an asterisk (*) have been shortened to facilitate viewing (see inset topology for original branch lengths). Numbers above branches represent posterior probabilities (PP). Red branches are those downstream of nodes with PP values ≤ 0.75. Letters (A–J) in gray circles are clades discussed in text. Rows of colored boxes to right side of image represent subfamily designations (see corresponding key) within the following three classification schemes: (1) “traditional” classification with ten subfamilies; (2) alternative “reduced” classification with two subfamilies; and (3) revised classification with ten subfamilies. See Data Accessibility for tree file.